
Tue 30 Sep 11:45: Cambridge MedAI Seminar - September 2025
Sign up on Eventbrite: https://medai_september2025.eventbrite.co.uk
Join us for the Cambridge AI in Medicine Seminar Series, hosted by the Cancer Research UK Cambridge Centre and the Department of Radiology at Addenbrooke’s. This series brings together leading experts to explore cutting-edge AI applications in healthcare—from disease diagnosis to drug discovery. It’s a unique opportunity for researchers, practitioners, and students to stay at the forefront of AI innovations and engage in discussions shaping the future of AI in healthcare.
This month’s seminar will be held on Tuesday 30 September 2025, 12-1pm at the Jeffrey Cheah Biomedical Centre (Main Lecture Theatre), University of Cambridge and streamed online via Zoom. A light lunch from Aromi will be served from 11:45. The event will feature the following talks:
Automated Lesion Segmentation of Stroke MRI Using nnU-Net: A Comprehensive External Validation – Dr Tammar Truzman, Postdoctoral Fellow, MRC Cognition and Brain Sciences Unit, University of Cambridge
Dr Tammar Truzman is a Postdoctoral Fellow at the MRC Cognition and Brain Sciences Unit, University of Cambridge, working with Prof. Matt Lambon Ralph and Dr. Ajay Halai. Her research focuses on language assessment and recovery in people with aphasia, combining neuroimaging, language rehabilitation, and computational modeling. She is also a licensed speech-language pathologist with expertise in language therapy and clinical translation.
Abstract: Accurate lesion segmentation is a critical step in stroke neuroimaging, both for advancing theoretical understanding of brain–behavior relationships and for enabling clinical applications. Deep learning methods have recently shown promise, but external validation across diverse datasets remains limited. In this talk, I will present a comprehensive evaluation of nnU-Net for stroke lesion segmentation across multiple acute and chronic datasets. I will discuss factors influencing model performance and generalization, including imaging modality, dataset size and quality and lesion volume. The results highlight both the potential and the current limitations of automated segmentation tools for translational use in stroke and aphasia research.
Deep Learning-Based Follicle Growth Prediction using a Transformer Architecture – Artsiom Hramyka, Postdoctoral Fellow, University of Cambridge
Artsiom is a Postdoctoral Researcher in Computer Science and Medicine at the University of Cambridge, where his work involves applying artificial intelligence and simulation modelling to solve complex healthcare problems. This research builds upon his doctoral work at the University of St Andrews, where he is completing his PhD thesis on the application of novel analytical frameworks and AI in healthcare. Currently, his primary focus is on the early detection of cancer as part of the CRUK International Alliance for Cancer Early Detection (ACED). In this role, he develops and calibrates multistate models that simulate the natural history of malignant cancers to evaluate and optimise screening strategies. His research also extends to other areas of medicine, including active collaborations where he applies machine learning to enhance fertility treatments with Imperial College London and to analyse treatment data in paediatric oncology with the Charlotte Maxeke Johannesburg Academic Hospital.
Abstract: Traditional methods for predicting ovarian follicle growth rely on the clinically unfeasible assumption of tracking individual follicles between ultrasound scans. This research introduces a novel approach that overcomes this limitation by predicting the entire follicle size distribution. We developed a decoder-only, GPT -like Transformer architecture to autoregressively forecast future follicle profiles from sequential scan data. Model performance was evaluated using distribution-level metrics, including Earth Mover’s Distance (EMD) and Chi-Square distance, across three clinically relevant scenarios simulating different data availability. Systematic hyperparameter optimisation resulted in a performance increase, a 10.2% improvement in EMD for short-term predictions. A key finding is the robust performance of the model when using only a single initial scan, demonstrating its potential utility in cases with missed appointments and highlighting the importance of training-inference consistency. This work represents the first application of a Transformer architecture for distribution-level follicle prediction, offering a more realistic tool for clinical decision support in assisted reproductive technology.
This is a hybrid event so you can also join via Zoom:
https://zoom.us/j/99050467573?pwd=UE5OdFdTSFdZeUtIcU1DbXpmdlNGZz09
Meeting ID: 990 5046 7573 and Passcode: 617729
We look forward to your participation! If you are interested in getting involved and presenting your work, please email Ines Machado at im549@cam.ac.uk
For more information about this seminar series, see: https://www.integratedcancermedicine.org/research/cambridge-medai-seminar-series/
- Speaker: Dr Tammar Truzman and Mr Artsiom Hramyka
- Tuesday 30 September 2025, 11:45-13:00
- Venue: Jeffrey Cheah Biomedical Centre (Main Lecture Theatre), University of Cambridge.
- Series: Cambridge MedAI Seminar Series; organiser: Hannah Clayton.
Fri 23 Jan 16:00: Title to be confirmed
Abstract not available
- Speaker: Professor Matthew Juniper, CUED
- Friday 23 January 2026, 16:00-17:00
- Venue: JDB Seminar Room, CUED.
- Series: Engineering - Dynamics and Vibration Tea Time Talks; organiser: div-c.
Fri 28 Nov 16:00: Title to be confirmed
Abstract not available
- Speaker: Dr Kyriakos Alexandros Chondrogiannis, ETH Zurich
- Friday 28 November 2025, 16:00-17:00
- Venue: JDB Seminar Room, CUED.
- Series: Engineering - Dynamics and Vibration Tea Time Talks; organiser: div-c.
Fri 21 Nov 16:00: Title to be confirmed
Abstract not available
- Speaker: Melisa Bozaci, PhD student, CUED
- Friday 21 November 2025, 16:00-17:00
- Venue: JDB Seminar Room, CUED.
- Series: Engineering - Dynamics and Vibration Tea Time Talks; organiser: div-c.
Fri 14 Nov 16:00: Title to be confirmed
Abstract not available
- Speaker: Dr Will Graham, CUED
- Friday 14 November 2025, 16:00-17:00
- Venue: JDB Seminar Room, CUED.
- Series: Engineering - Dynamics and Vibration Tea Time Talks; organiser: div-c.
Fri 31 Oct 16:00: Title to be confirmed
Abstract not available
- Speaker: Andrew Jenkins, PhD student, CUED
- Friday 31 October 2025, 16:00-17:00
- Venue: JDB Seminar Room, CUED.
- Series: Engineering - Dynamics and Vibration Tea Time Talks; organiser: div-c.
Fri 17 Oct 16:00: Introduction to the DVRG and poster session
Abstract not available
- Speaker: Professor David Cebon, CUED
- Friday 17 October 2025, 16:00-17:00
- Venue: JDB Seminar Room, CUED.
- Series: Engineering - Dynamics and Vibration Tea Time Talks; organiser: div-c.
Fri 28 Nov 14:00: Mechanics and data science to model aneurysms
Abstract not available
- Speaker: Professor Jose Merodio, Polytechnic University of Madrid
- Friday 28 November 2025, 14:00-15:00
- Venue: Oatley 1 Meeting Room, Department of Engineering.
- Series: Engineering - Mechanics and Materials Seminar Series; organiser: div-c.
Wed 19 Nov 16:00: Title to be confirmed
Abstract not available
- Speaker: Fabian Hebestreit (Bielefeld)
- Wednesday 19 November 2025, 16:00-17:00
- Venue: MR13.
- Series: Differential Geometry and Topology Seminar; organiser: Oscar Randal-Williams.
Thu 13 Nov 11:30: Title to be confirmed
Abstract not available
- Speaker: Nico Gray, University of Manchester
- Thursday 13 November 2025, 11:30-12:30
- Venue: Open Plan Area, Institute for Energy and Environmental Flows, Madingley Rise CB3 0EZ.
- Series: Institute for Energy and Environmental Flows (IEEF); organiser: Catherine Pearson.
Thu 02 Oct 11:30: Fracture Network Connectivity and Its Evolution
Fractures are ubiquitous in crustal rocks due to the harsh environment of the deep subsurface and the inherent brittleness of the rock. These fractures, which represent planes of rock failure, significantly influence rock stability and are pivotal in predicting geohazards. Additionally, fractures typically provide highly permeable pathways for fluid flow in the subsurface, making them crucial for oil and gas exploration and production, subsurface hydrogen storage, geological CO₂ sequestration, and nuclear waste disposal.
Connectivity is a key characteristic of fracture networks, intricately linked to their mechanical and hydrological properties. In this seminar, an automated fracture interpretation technique is introduced, enabling the acquisition of large amounts of natural fracture data. Subsequently, an efficient discrete fracture network modeling software is presented, allowing the generation of complex fracture networks and the realization of advanced functionalities. Novel fracture metrics for single and multiple fracture clusters are also introduced, providing a means to quantify the connectivity of complex fracture networks and investigate potential influential factors. A DEM -LBM method is adopted to simulate the hydraulic fracturing process, demonstrating the dynamic evolution of fracture networks under significant stress disturbances. During this process, the dynamic evolution of connectivity can be characterized using the proposed novel metrics.
- Speaker: Weiwei Zhu, Institute of Geology and Geophysics, Chinese Academy of Sciences
- Thursday 02 October 2025, 11:30-12:30
- Venue: Open Plan Area, Institute for Energy and Environmental Flows, Madingley Rise CB3 0EZ.
- Series: Institute for Energy and Environmental Flows (IEEF); organiser: Catherine Pearson.
Thu 16 Oct 14:00: Towards realistic and understandable models of human speech processing
Abstract not available
- Speaker: Jim Magnuson (U. of Connecticut and BCBL)
- Thursday 16 October 2025, 14:00-15:00
- Venue: MRC Cognition and Brain Sciences Unit, 15 Chaucer Road, Cambridge - Lecture Theatre.
- Series: Chaucer Club; organiser: Vicky Collins.
Thu 06 Nov 15:00: Title to be confirmed
Abstract not available
- Speaker: Paul Dastoor, Department of Physics, University of Newcastle, New South Wales, Australia
- Thursday 06 November 2025, 15:00-16:00
- Venue: Seminar Room West, Room A0.015, Ray Dolby Centre, Cavendish Laboratory.
- Series: Physics and Chemistry of Solids Group; organiser: Stephen Walley.
Tue 27 Jan 16:00: Title to be confirmed
Abstract not available
- Speaker: Xiyuan Zhang, Amazon
- Tuesday 27 January 2026, 16:00-17:00
- Venue: Online.
- Series: Mobile and Wearable Health Seminar Series; organiser: Cecilia Mascolo.
Thu 25 Sep 14:00: The Many Guises of Reactive Metabolite Signalling
We present how a combination of small-molecule chemistry, chemical biology, and model-organism engineering biology helps to resolve the key mechanistic puzzles surrounding reactive metabolite signalling in health & disease. Focus will be placed on innovations and applications of interdisciplinary technologies with which we can decode the multifaceted biology of reactive metabolites in living systems with precise timing, locale, contexts, and metabolite-chemotype, and how the resulting new knowledge illuminates streamlined therapeutic avenues. Speaker bio: Aye completed her undergraduate studies in chemistry at Oxford UK (2000-2004), and doctoral research in organic chemistry with Prof. David Evans at Harvard University (2004-2009). She then switched her research discipline to life science and received her postdoctoral training with Prof. JoAnne Stubbe at MIT (2009-2012). Science in the Aye lab seeks to understand non-canonical cell signalling processes. Her laboratory is most well-known for investigations into electrophile signalling, a nuanced communication mode whereby on-target engagement between specific reactive metabolites and target proteins, orchestrates precision responses at cellular/organismal levels.
Contributions from her team have been recognised by several honours; recent examples include: 2025 ERC Advanced Grant, 2024 UK Academy of Medical Sciences Professorship, Klaus Grohe Prize in Drug Discovery, 2022 ERC Consolidator Grant, 2021 Tetrahedron young investigator award, International Chemical Biology Society Global Lectureship Award for distinguished investigators in chemical biology, ACS Arthur Cope Scholar, and 2020 ACS Eli Lilly award in biological chemistry.
- Speaker: Prof. Yimon Aye - Chemical Biology at the University of Oxford
- Thursday 25 September 2025, 14:00-15:00
- Venue: Department of Chemistry, Cambridge, Wolfson Lecture Theatre.
- Series: Biological Chemistry Research Interest Group; organiser: Xani Thorman.
Wed 22 Oct 16:00: Title to be confirmed
Abstract not available
- Speaker: Sungkyung Kang (Cambridge)
- Wednesday 22 October 2025, 16:00-17:00
- Venue: MR13.
- Series: Differential Geometry and Topology Seminar; organiser: Oscar Randal-Williams.
Thu 30 Oct 11:30: Title to be confirmed
Abstract not available
- Speaker: Megan Davies Wykes (University of Cambridge)
- Thursday 30 October 2025, 11:30-12:30
- Venue: Open Plan Area, Institute for Energy and Environmental Flows, Madingley Rise CB3 0EZ.
- Series: Institute for Energy and Environmental Flows (IEEF); organiser: Catherine Pearson.
Thu 02 Oct 15:30: Chronic stress-mediated effects on the immune system: links to mental health Note unusual time
Dr. Stacey Kigar is a research associate in the Department of Medicine and affiliate of the Department of Psychiatry at Cambridge. She obtained her PhD in Molecular and Cellular Pharmacology at the University of Wisconsin-Madison, and did postdoctoral work at the National Institute of Mental Health in the United States before moving to Cambridge in September 2020. Dr. Kigar uses both preclinical animal models and clinical research samples to investigate biological mechanisms underlying mental health and neurological disorders. She is generously supported by the Cambridge BRC , Alzheimer’s Research UK, and the MindEd Charitable Trust.
Hosting: Dr Chrysa Kapeni, CRUK
Note unusual time
- Speaker: Stacey Kigar, CRUK
- Thursday 02 October 2025, 15:30-16:30
- Venue: Lecture Theatre, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus.
- Series: Cambridge Immunology Network Seminar Series; organiser: Liat Churley.
Wed 01 Oct 18:45: A Buzzing of Bees: Tales of Honeybees Through History Joint meeting with the Cambridgeshire Beekeepers' Association (NB Wednesday)
Dino Martins will talk about the relationship between honeybees and people.
Honeybees are one of the most familiar and widespread insects that are kept, managed, exploited and familiar to humanity. It is often said that ‘There is a crisis around bees’, but the reality is that overall honeybee numbers are actually increasing worldwide, the result of more intensive management, mass production and commercial trade of queens and colonies.
With examples drawn from around the world, this talk will highlight the complex, multi-faceted relationship we have with honeybees and explore how we can all play a role in better stewardship of the planet.
Joint meeting with the Cambridgeshire Beekeepers' Association (NB Wednesday)
- Speaker: Dino Martins
- Wednesday 01 October 2025, 18:45-20:00
- Venue: Main Seminar Room (First Floor) David Attenborough Building, University of Cambridge Pembroke St, Cambridge CB2 3QZ.
- Series: Cambridge Natural History Society; organiser: events.
Thu 09 Oct 18:45: The Past and Future of Natural History
Brian Eversham will present a history of naturalists over 3000 years, of trends in wildlife and the study of wildlife, and some personal thoughts on where it’s heading, and where the next generation of field naturalists might come from.
- Speaker: Chief Executive of the Wildlife Trust for Bedfordshire, Cambridgeshire and Northamptonshire
- Thursday 09 October 2025, 18:45-20:00
- Venue: Main Seminar Room (First Floor) David Attenborough Building, University of Cambridge Pembroke St, Cambridge CB2 3QZ.
- Series: Cambridge Natural History Society; organiser: events.